Publications

2026

  • Md Zainul Ali, Manjari Kiran, Pankaj Singh Dholaniya* (2026) , Identification of genes associated with smell dysfunction in Parkinson’s disease, Clinical Parkinsonism & Related Disorders, 14, 100453. DOI: 10.1016/j.prdoa.2026.100453

  • Pankaj Singh Dholaniya, Helena Islam, Syed Baseeruddin Alvi, Muhamad Mergaye, Onur Kanisicak, Mahmood Khan* (2026) , Transcriptional remodeling of cardiomyocytes and fibroblasts during post-myocardial infarction recovery, Scientific Reports, 16, 12120. DOI: 10.1038/s41598-026-41631-y

  • Neha Saroj, Harshitha Velangani, Shashi Kiran, Pankaj Singh Dholaniya* (2026) , Deletion of TOP2B Promoter using CRISPR-Cas9 induces Senescence in HEK 293T Cells, Biochemistry and Biophysics Reports, 46, 102620. DOI: 10.1016/j.bbrep.2026.102620

  • Md Zainul Ali, Pankaj Singh Dholaniya* (2026) , Interpretable Symptom-Based Machine Learning for Parkinson's Disease Prediction: A Feasibility Study, medRxiv, . DOI: 10.64898/2026.05.15.26352866

2025

  • Neha Saroj, Pankaj Singh Dholaniya*, Syed Baseeruddin Alvi, Divya Sridharan, Navisha Soni, Syed Abdullah Ashraf, Ayza Choudhry, Yusuf Ali Ashraf, Sarah Kathleen Mikula, Dinender Kumar Singla, Mahmood Khan* (2025) , siRNA-mediated knockdown of TOP2B protects hiPSC-derived cardiomyocytes from doxorubicin-induced toxicity, Life Sciences, 371,123595. DOI: 10.1016/j.lfs.2025.123595

2024

  • Syed Baseeruddin Alvi, Nooruddin Pracha, Mahmoud Shalaan, Pankaj Singh Dholaniya, Muhamad Mergaye, Divya Sridharan, Mahmood Khan* (2024) , Fabrication and Optimization of Poly (ε-caprolactone) Microspheres Loaded with S-Nitroso-N-Acetylpenicillamine for Nitric Oxide Delivery, Biomedicines, MDPI,12,1363. DOI:10.3390/biomedicines12061363

  • Prateek Gupta, Pankaj Singh Dholaniya, Kunnappady Princy, Athira Sethu Madhavan, Yellamaraju Sreelakshmi, Rameshwar Sharma* (2024) , Augmenting tomato functional genomics with a genome-wide induced genetic variation resource, Frontiers in Plant Science, Frontiers Media SA,14,1290937. DOI:10.3389/fpls.2023.1290937

2023

  • Ali Zainul MD, Dholaniya, Pankaj Singh* (2023) , Gender-Specific Classification Models for Parkinson's Disease using Non-Motor Symptoms and DNA Methylation Data, Movement Disorders. Vol. 38, RIVER ST, HOBOKEN 07030-5774, NJ USA: WILEY. DOI

2022

  • Kumari, Baby., Dholaniya, Pankaj Singh* (2022) , Parkinson`s disease gene prioritising using an efficient and biologically appropriate network-based consensus strategy, Journal of Computational Science, Elsevier,65,101879. DOI:

  • Ali Zainul MD, Dholaniya, Pankaj Singh* (2022), Oxidative phosphorylation mediated pathogenesis of Parkinson`s disease and its implication via Akt signaling, Neurochemistry International, Elsevier,152,105344 . DOI:

  • S, Neha., Ahmad, Mohammad., Kumari, Baby., Ali Zainul MD., Dholaniya, Pankaj Singh* (2022), Book Chapter: Early Diagnosis of Parkinson`s Disease: Utility of Animal Models, Book: Parkinson’s Disease - Animal Models, Current Therapies and Clinical Trials, IntechOpen. DOI:

  • Sahu S., Dholaniya, Pankaj Singh*., T Sobha Rani*. (2022) , Identifying the candidate genes using co-expression, GO, and machine learning techniques for Alzheimer’s disease, Network Modeling and Analysis in Health Informatics and Bioinformatics, Springer,11,10. DOI:

  • Manukonda Radhika, Yenuganti Vengala Rao, Nagar Nupur, Dholaniya Pankaj Singh, Malpotra Shivani, Attem Jyothi, Reddy Mamatha M., Jakati Saumya, Mishra Dilip K, Pallu Reddanna, Krishna Mohan Poluri, Vemuganti Geeta K., and Kaliki Swathi (2022), Comprehensive Analysis of Serum Small Extracellular Vesicles-Derived Coding and Non-Coding RNAs from Retinoblastoma Patients for Identifying Regulatory Interactions , Cancers, 14(17),4179. DOI:

2021

  • S, Neha., Dholaniya, Pankaj Singh*., (2021), The Prevailing Role of Topoisomerase 2 Beta and its Associated Genes in Neurons, Molecular Neurobiology, Springer,58,,6443–6459. DOI:

  • Dholaniya, Pankaj Singh*., Rizvi, Samreen. (2021) , Effect of various sequence descriptors in predicting human protein-protein interactions using ANN-based prediction models, Current Bioinformatics, Bentham Science,16,8,1024 - 1033. DOI:

  • Muttineni, Radhakrishna., Kammili, Nagamani., Bingi, Thrilok Chander., Rao M, Raja., Putty, Kalyani., Dholaniya, Pankaj Singh., Puli, Ravi Kumar., Pakalapati, Sunitha., Doodipala, Mallikarjuna Reddy., Upadhyay, Amit A., (2021) , Clinical and whole genome characterization of SARS-CoV-2 in India , Plos one, Public Library of Science San Francisco, CA USA,16,2,e0246173. DOI:

2020

  • Kumari, Baby., Mandal, Mukulika., Dholaniya, Pankaj Singh*, (2020), Analysis of multiple transcriptome data to determine age-associated genes for the progression of Parkinson`s disease, Meta Gene, Elsevier,25,,100712. DOI:

  • Gupta, Prateek., Dholaniya, Pankaj Singh., Devulapalli, Sameera., Tawari, Nilesh Ramesh., Sreelakshmi, Yellamaraju., Sharma, Rameshwar., (2020) , Reanalysis of Genome Sequences of tomato accessions and its wild relatives: Development of tomato genomic variation (TGV) database integrating SNPs and INDELs polymorphisms, Bioinformatics, Oxford University Press,36,20,4984-4990. DOI:

2019 & before

  • Kakade, Aishwarya., Kumari, Baby., Dholaniya, Pankaj Singh* (2018), eature selection using logistic regression in case–control DNA methylation data of Parkinson`s disease: A comparative study, Journal of theoretical biology, Academic Press,457,14-18. DOI:

  • Bollimpelli, V Satish., Dholaniya, Pankaj S., Kondapi, Anand K., (2017) , Topoisomerase IIβ and its role in different biological contexts, Archives of biochemistry and biophysics, Academic Press,633,78-84. DOI: